BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032C03SP1|AL429536
(881 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1572 1722 0.0
>3x_Contig1572
Length = 12810
Score = 1722 bits (868), Expect = 0.0
Identities = 878/881 (99%), Gaps = 1/881 (0%)
Strand = Plus / Minus
Query: 1 gatcccancaaaggcttacaaagtgttatctcttttgagacttgttgagttgaacactgg 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8325 gatcccagcaaaggcttacaaagtgttatctcttttgagacttgttgagttgaacactgg 8266
Query: 61 tgttttcatcaaacttaccaaggacgtgtacccattgttgaaacttgtatcaccatatat 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8265 tgttt-catcaaacttaccaaggacgtgtacccattgttgaaacttgtatcaccatatat 8207
Query: 121 tgttatcggacaaccttcacttgcatctatccgttctttaatccaaaagagatctagaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8206 tgttatcggacaaccttcacttgcatctatccgttctttaatccaaaagagatctagaat 8147
Query: 181 aatgtggcaaaggccagaagataaagaaccaaaagagataatcttgaatgacaacaatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8146 aatgtggcaaaggccagaagataaagaaccaaaagagataatcttgaatgacaacaatat 8087
Query: 241 cgttgaagagaaattaggtgatgaaggtgtcatttgtatcgaggatatcatccatgagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8086 cgttgaagagaaattaggtgatgaaggtgtcatttgtatcgaggatatcatccatgagat 8027
Query: 301 ttcgacgttgggcgaaaatttctcgaaatgtactttcttcctattaccattcaaattgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8026 ttcgacgttgggcgaaaatttctcgaaatgtactttcttcctattaccattcaaattgaa 7967
Query: 361 cagagaagtcagtggattcggtgccatctcccgtttgaataaactgaaaatgcgcgaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7966 cagagaagtcagtggattcggtgccatctcccgtttgaataaactgaaaatgcgcgaaca 7907
Query: 421 aaacaagaagactcgtcaaatttcaaacgctgccacggctccagttatccaagtagatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7906 aaacaagaagactcgtcaaatttcaaacgctgccacggctccagttatccaagtagatat 7847
Query: 481 cgactcaatgatttccaagttgaattgattaactataamaggaaaatatctgtacaatag 540
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 7846 cgactcaatgatttccaagttgaattgattaactataaaaggaaaatatctgtacaatag 7787
Query: 541 acatcgggctcccattggccctacccacatatgtagaaatacattactctattcactact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7786 acatcgggctcccattggccctacccacatatgtagaaatacattactctattcactact 7727
Query: 601 gcatttagttatgtttaacatttgatatagcagacgctaccgccaggcacaatatattcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7726 gcatttagttatgtttaacatttgatatagcagacgctaccgccaggcacaatatattcc 7667
Query: 661 ccttccctcttgccattcgctgtacttgtggtggattccaattcagcgcagtcacgtgct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7666 ccttccctcttgccattcgctgtacttgtggtggattccaattcagcgcagtcacgtgct 7607
Query: 721 agtaatcaccgcatttttttcttttcctttcaggctaaaaccggttccgggcctgatccc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7606 agtaatcaccgcatttttttcttttcctttcaggctaaaaccggttccgggcctgatccc 7547
Query: 781 tgcactcattttctaacggaaaaccttcagaagcataactacccattccagtttagagtc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7546 tgcactcattttctaacggaaaaccttcagaagcataactacccattccagtttagagtc 7487
Query: 841 atgacaggttcaacatcagatgcttcatatacttttatata 881
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 7486 atgacaggttcaacatcagatgcttcatatacttttatata 7446
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7447
Number of Sequences: 1807
Number of extensions: 7447
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 881
length of database: 10,358,551
effective HSP length: 16
effective length of query: 865
effective length of database: 10,329,639
effective search space: 8935137735
effective search space used: 8935137735
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)